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***  2J4W Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex  ***

Normal Mode Analysis for ID 2608162333311823063

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6856
mode 8 1.70 0.6930
mode 9 2.38 0.6811
mode 10 2.64 0.7150
mode 11 2.75 0.6514
mode 12 2.86 0.3081
mode 13 3.39 0.1675
mode 14 3.75 0.4613
mode 15 3.97 0.0066
mode 16 4.17 0.2014
mode 17 4.33 0.4963
mode 18 4.51 0.4115
mode 19 4.82 0.4912
mode 20 4.93 0.3238
mode 21 5.17 0.3391
mode 22 5.26 0.3638
mode 23 5.51 0.2231
mode 24 5.57 0.0349
mode 25 5.73 0.3319
mode 26 5.95 0.5814
mode 27 6.15 0.4617
mode 28 6.33 0.2760
mode 29 6.41 0.3297
mode 30 6.53 0.1687
mode 31 6.73 0.5284
mode 32 6.83 0.3665
mode 33 6.93 0.3836
mode 34 7.04 0.3780
mode 35 7.13 0.2190
mode 36 7.21 0.1576
mode 37 7.30 0.2752
mode 38 7.47 0.3219
mode 39 7.55 0.4896
mode 40 7.66 0.3104
mode 41 7.75 0.4264
mode 42 7.89 0.2230
mode 43 7.92 0.3802
mode 44 8.00 0.2879
mode 45 8.13 0.2987
mode 46 8.20 0.2964
mode 47 8.29 0.3403
mode 48 8.30 0.3775
mode 49 8.46 0.3855
mode 50 8.55 0.3531
mode 51 8.69 0.3261
mode 52 8.83 0.3802
mode 53 8.86 0.3293
mode 54 8.91 0.3157
mode 55 8.96 0.3249
mode 56 9.07 0.2175
mode 57 9.09 0.1887
mode 58 9.18 0.2151
mode 59 9.29 0.2250
mode 60 9.38 0.3736
mode 61 9.48 0.2915
mode 62 9.52 0.2903
mode 63 9.66 0.3582
mode 64 9.75 0.3388
mode 65 9.80 0.3611
mode 66 9.83 0.2000
mode 67 9.98 0.2537
mode 68 10.07 0.2971
mode 69 10.14 0.3063
mode 70 10.17 0.3461
mode 71 10.19 0.1418
mode 72 10.30 0.3175
mode 73 10.35 0.3246
mode 74 10.40 0.3192
mode 75 10.50 0.2631
mode 76 10.63 0.4079
mode 77 10.68 0.3962
mode 78 10.75 0.1969
mode 79 10.87 0.4427
mode 80 10.92 0.4641
mode 81 10.95 0.3294
mode 82 11.01 0.3174
mode 83 11.07 0.4128
mode 84 11.18 0.4588
mode 85 11.26 0.4666
mode 86 11.29 0.2813
mode 87 11.34 0.5181
mode 88 11.39 0.4006
mode 89 11.43 0.3388
mode 90 11.56 0.4360
mode 91 11.63 0.3588
mode 92 11.68 0.3412
mode 93 11.76 0.3086
mode 94 11.82 0.3890
mode 95 11.86 0.4918
mode 96 11.92 0.5378
mode 97 11.96 0.4645
mode 98 12.02 0.2600
mode 99 12.08 0.2924
mode 100 12.10 0.4722
mode 101 12.16 0.3633
mode 102 12.25 0.2508
mode 103 12.29 0.3770
mode 104 12.42 0.3767
mode 105 12.45 0.3544
mode 106 12.51 0.2998

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.