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***  GTP-BINDING 21-JAN-97 1MH1  ***

Normal Mode Analysis for ID 2610071816113154659

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 3 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0167
mode 8 1.24 0.2052
mode 9 1.31 0.0518
mode 10 1.35 0.0460
mode 11 1.45 0.1000
mode 12 1.50 0.0404
mode 13 1.71 0.1258
mode 14 1.78 0.1337
mode 15 1.82 0.0892
mode 16 1.93 0.1375
mode 17 2.09 0.2121
mode 18 2.25 0.2350
mode 19 2.27 0.1468
mode 20 2.32 0.1380
mode 21 2.34 0.1193
mode 22 2.47 0.1763
mode 23 2.58 0.1317
mode 24 2.74 0.2828
mode 25 2.81 0.2676
mode 26 2.91 0.3933
mode 27 2.95 0.3592
mode 28 3.03 0.3520
mode 29 3.11 0.2860
mode 30 3.13 0.3617
mode 31 3.22 0.3854
mode 32 3.28 0.1085
mode 33 3.32 0.5859
mode 34 3.41 0.1346
mode 35 3.46 0.2711
mode 36 3.49 0.1237
mode 37 3.51 0.4061
mode 38 3.58 0.4287
mode 39 3.68 0.3793
mode 40 3.73 0.1812
mode 41 3.76 0.3581
mode 42 3.82 0.4221
mode 43 3.87 0.1094
mode 44 3.88 0.3956
mode 45 3.95 0.0728
mode 46 4.01 0.3028
mode 47 4.05 0.4456
mode 48 4.10 0.2388
mode 49 4.13 0.1592
mode 50 4.15 0.2956
mode 51 4.21 0.1381
mode 52 4.26 0.1234
mode 53 4.28 0.2194
mode 54 4.33 0.0438
mode 55 4.36 0.2620
mode 56 4.40 0.1430
mode 57 4.44 0.1675
mode 58 4.46 0.1023
mode 59 4.52 0.1791
mode 60 4.54 0.2436
mode 61 4.56 0.1812
mode 62 4.58 0.1661
mode 63 4.63 0.3253
mode 64 4.67 0.2249
mode 65 4.70 0.3995
mode 66 4.75 0.1943
mode 67 4.76 0.4253
mode 68 4.83 0.1202
mode 69 4.87 0.0439
mode 70 4.89 0.2065
mode 71 4.92 0.2778
mode 72 4.95 0.1966
mode 73 4.98 0.2207
mode 74 4.99 0.2981
mode 75 5.03 0.3382
mode 76 5.10 0.3881
mode 77 5.13 0.3295
mode 78 5.18 0.3446
mode 79 5.19 0.4245
mode 80 5.22 0.3675
mode 81 5.24 0.3603
mode 82 5.27 0.3853
mode 83 5.32 0.1099
mode 84 5.38 0.4231
mode 85 5.42 0.3270
mode 86 5.43 0.3175
mode 87 5.47 0.2507
mode 88 5.51 0.2915
mode 89 5.51 0.4359
mode 90 5.52 0.3312
mode 91 5.56 0.4528
mode 92 5.57 0.2507
mode 93 5.62 0.3361
mode 94 5.65 0.2883
mode 95 5.66 0.4391
mode 96 5.70 0.4184
mode 97 5.72 0.3723
mode 98 5.73 0.1178
mode 99 5.79 0.4606
mode 100 5.84 0.1426
mode 101 5.87 0.2965
mode 102 5.88 0.2310
mode 103 5.90 0.3246
mode 104 5.92 0.0913
mode 105 5.95 0.3654
mode 106 5.96 0.3580

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.