CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  OtsA  ***

Normal Mode Analysis for ID 261012151517738164

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.7732
mode 8 1.10 0.7082
mode 9 1.25 0.6826
mode 10 1.95 0.6581
mode 11 2.59 0.7515
mode 12 3.13 0.7621
mode 13 3.28 0.6713
mode 14 3.79 0.5219
mode 15 3.91 0.5992
mode 16 4.32 0.1420
mode 17 4.56 0.0264
mode 18 4.65 0.6072
mode 19 4.81 0.2875
mode 20 5.22 0.4131
mode 21 5.41 0.4223
mode 22 5.62 0.3958
mode 23 5.87 0.3997
mode 24 6.05 0.4926
mode 25 6.10 0.5633
mode 26 6.20 0.3482
mode 27 6.31 0.4129
mode 28 6.43 0.4966
mode 29 6.59 0.5892
mode 30 6.73 0.2108
mode 31 6.83 0.3340
mode 32 6.86 0.4481
mode 33 7.01 0.1271
mode 34 7.08 0.1926
mode 35 7.29 0.3698
mode 36 7.44 0.3757
mode 37 7.51 0.4523
mode 38 7.60 0.3203
mode 39 7.74 0.3116
mode 40 7.77 0.4194
mode 41 7.87 0.4004
mode 42 7.90 0.1131
mode 43 8.02 0.3328
mode 44 8.08 0.3200
mode 45 8.25 0.5005
mode 46 8.30 0.4290
mode 47 8.40 0.1348
mode 48 8.52 0.4875
mode 49 8.55 0.3537
mode 50 8.63 0.2505
mode 51 8.66 0.4318
mode 52 8.76 0.4112
mode 53 8.82 0.3317
mode 54 8.96 0.5134
mode 55 8.99 0.4793
mode 56 9.07 0.5721
mode 57 9.20 0.4894
mode 58 9.22 0.4686
mode 59 9.31 0.3097
mode 60 9.32 0.3955
mode 61 9.46 0.3215
mode 62 9.52 0.5574
mode 63 9.57 0.5769
mode 64 9.72 0.5419
mode 65 9.78 0.4234
mode 66 9.86 0.3926
mode 67 10.00 0.3025
mode 68 10.04 0.5331
mode 69 10.10 0.2783
mode 70 10.11 0.5191
mode 71 10.19 0.4760
mode 72 10.28 0.5088
mode 73 10.37 0.3468
mode 74 10.42 0.4232
mode 75 10.43 0.3533
mode 76 10.49 0.5225
mode 77 10.60 0.3428
mode 78 10.69 0.4812
mode 79 10.72 0.5238
mode 80 10.83 0.2725
mode 81 10.88 0.5913
mode 82 10.93 0.5886
mode 83 10.99 0.3701
mode 84 11.02 0.4492
mode 85 11.08 0.4312
mode 86 11.15 0.4939
mode 87 11.18 0.4466
mode 88 11.22 0.4846
mode 89 11.33 0.5637
mode 90 11.42 0.4992
mode 91 11.45 0.3412
mode 92 11.54 0.4304
mode 93 11.59 0.4702
mode 94 11.62 0.3236
mode 95 11.67 0.5825
mode 96 11.70 0.2489
mode 97 11.75 0.4721
mode 98 11.77 0.5243
mode 99 11.78 0.4495
mode 100 11.89 0.4194
mode 101 11.93 0.3590
mode 102 11.96 0.5362
mode 103 12.06 0.5073
mode 104 12.09 0.5047
mode 105 12.17 0.2246
mode 106 12.21 0.4035

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.