CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  DNA polimerase com DNA  ***

CA distance fluctuations for 2610141417151088793

---  normal mode 8  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ASP 92 0.05 PRO 7 -0.41 SER 334
ASP 92 0.06 GLN 8 -0.50 ALA 185
ASP 92 0.06 GLU 9 -0.51 GLU 186
ASP 92 0.06 THR 10 -0.46 GLU 186
ASP 92 0.05 LEU 11 -0.37 GLU 186
THR 304 0.08 ASN 12 -0.31 GLU 186
THR 304 0.07 GLY 13 -0.35 SER 187
THR 304 0.10 GLY 14 -0.31 ARG 149
THR 304 0.13 ILE 15 -0.24 ARG 149
THR 304 0.11 THR 16 -0.24 ARG 149
THR 304 0.11 ASP 17 -0.29 ARG 149
THR 304 0.15 MET 18 -0.23 ARG 149
THR 304 0.17 LEU 19 -0.16 ARG 149
THR 304 0.14 THR 20 -0.17 GLY 189
THR 304 0.15 GLU 21 -0.20 GLU 147
THR 304 0.19 LEU 22 -0.13 GLU 147
THR 304 0.19 ALA 23 -0.08 GLU 147
THR 304 0.17 ASN 24 -0.09 GLU 147
THR 304 0.19 PHE 25 -0.08 GLU 147
THR 304 0.23 GLU 26 -0.04 GLU 147
THR 304 0.20 LYS 27 -0.04 SER 109
THR 304 0.18 ASN 28 -0.03 ARG 112
THR 304 0.20 VAL 29 -0.04 THR 93
THR 304 0.23 SER 30 -0.06 ALA 32
THR 304 0.23 GLN 31 -0.06 ILE 33
THR 304 0.27 ALA 32 -0.06 HIS 34
LYS 280 0.27 ILE 33 -0.06 GLN 31
LYS 280 0.34 HIS 34 -0.06 ALA 32
THR 304 0.29 LYS 35 -0.04 SER 30
LYS 280 0.25 TYR 36 -0.04 SER 109
LYS 280 0.31 ASN 37 -0.05 SER 109
LYS 280 0.31 ALA 38 -0.03 SER 109
THR 304 0.21 TYR 39 -0.06 ARG 149
ILE 277 0.19 ARG 40 -0.06 SER 229
ILE 277 0.25 LYS 41 -0.04 SER 229
ALA 284 0.19 ALA 42 -0.06 ARG 149
THR 304 0.13 ALA 43 -0.13 GLY 189
THR 304 0.08 SER 44 -0.11 GLY 179
THR 304 0.09 VAL 45 -0.09 ASP 276
THR 304 0.10 ILE 46 -0.15 ALA 185
SER 95 0.05 ALA 47 -0.25 SER 180
SER 95 0.04 LYS 48 -0.25 SER 275
THR 304 0.05 TYR 49 -0.21 SER 334
ASP 92 0.04 PRO 50 -0.29 SER 334
THR 304 0.05 HIS 51 -0.25 ALA 185
THR 304 0.08 LYS 52 -0.28 GLU 186
THR 304 0.12 ILE 53 -0.22 GLU 186
THR 304 0.14 LYS 54 -0.21 GLU 186
THR 304 0.18 SER 55 -0.17 GLU 186
THR 304 0.22 GLY 56 -0.14 GLU 186
THR 304 0.23 ALA 57 -0.11 GLU 186
THR 304 0.18 GLU 58 -0.13 GLU 186
THR 304 0.19 ALA 59 -0.12 GLU 186
THR 304 0.25 LYS 60 -0.08 ARG 149
THR 304 0.22 LYS 61 -0.06 ARG 149
GLU 288 0.19 LEU 62 -0.05 ARG 149
ALA 284 0.28 PRO 63 -0.03 SER 109
ALA 284 0.31 GLY 64 -0.03 SER 109
THR 304 0.25 VAL 65 -0.06 ARG 149
THR 304 0.32 GLY 66 -0.05 ARG 149
THR 304 0.33 THR 67 -0.07 LYS 148
THR 304 0.31 LYS 68 -0.08 LYS 148
THR 304 0.26 ILE 69 -0.10 ARG 149
THR 304 0.25 ALA 70 -0.11 ARG 149
THR 304 0.26 GLU 71 -0.12 ARG 149
THR 304 0.23 LYS 72 -0.15 ARG 149
THR 304 0.20 ILE 73 -0.17 ARG 149
THR 304 0.21 ASP 74 -0.16 ARG 149
THR 304 0.21 GLU 75 -0.17 ARG 149
THR 304 0.17 PHE 76 -0.21 ARG 149
THR 304 0.16 LEU 77 -0.22 GLU 186
THR 304 0.17 ALA 78 -0.21 GLU 186
THR 304 0.17 THR 79 -0.22 ARG 149
THR 304 0.14 GLY 80 -0.26 ARG 149
THR 304 0.16 LYS 81 -0.24 LYS 148
THR 304 0.19 LEU 82 -0.20 LYS 148
THR 304 0.20 ARG 83 -0.17 LYS 148
THR 304 0.22 LYS 84 -0.14 LYS 148
THR 304 0.19 LEU 85 -0.17 LYS 148
THR 304 0.17 GLU 86 -0.20 LYS 148
THR 304 0.19 LYS 87 -0.15 LYS 148
THR 304 0.18 ILE 88 -0.13 GLU 147
THR 304 0.16 ARG 89 -0.19 GLU 147
THR 304 0.15 GLN 90 -0.17 GLY 144
THR 304 0.16 ASP 91 -0.10 GLY 144
THR 304 0.15 ASP 92 -0.08 LYS 248
THR 304 0.16 THR 93 -0.05 LYS 248
THR 304 0.17 SER 94 -0.06 PHE 99
THR 304 0.15 SER 95 -0.12 PHE 99
THR 304 0.14 SER 96 -0.07 LYS 141
THR 304 0.15 ILE 97 -0.04 LYS 141
THR 304 0.15 ASN 98 -0.08 ARG 89
THR 304 0.14 PHE 99 -0.17 ARG 89
THR 304 0.13 LEU 100 -0.10 ARG 89
THR 304 0.13 THR 101 -0.10 ARG 89
THR 304 0.12 ARG 102 -0.15 ARG 89
THR 304 0.11 VAL 103 -0.13 ASP 17
THR 304 0.10 SER 104 -0.15 ASP 17
THR 304 0.10 GLY 105 -0.13 GLU 9
THR 304 0.11 ILE 106 -0.09 ASP 17
THR 304 0.14 GLY 107 -0.09 THR 20
THR 304 0.16 PRO 108 -0.05 ASN 24
THR 304 0.15 SER 109 -0.06 ILE 33
THR 304 0.13 ALA 110 -0.05 GLU 9
THR 304 0.14 ALA 111 -0.03 ASP 17
THR 304 0.15 ARG 112 -0.05 GLN 31
THR 304 0.13 LYS 113 -0.05 ILE 33
THR 304 0.12 PHE 114 -0.03 GLN 31
THR 304 0.13 VAL 115 -0.04 GLN 31
THR 304 0.14 ASP 116 -0.05 GLN 31
THR 304 0.12 GLU 117 -0.04 GLN 31
THR 304 0.12 GLY 118 -0.04 GLN 31
THR 304 0.11 ILE 119 -0.03 HIS 222
THR 304 0.12 LYS 120 -0.05 GLN 90
THR 304 0.11 THR 121 -0.11 GLN 90
THR 304 0.10 LEU 122 -0.12 GLN 90
THR 304 0.10 GLU 123 -0.10 GLN 90
THR 304 0.10 ASP 124 -0.06 GLN 90
THR 304 0.10 LEU 125 -0.07 ARG 89
THR 304 0.08 ARG 126 -0.07 GLN 90
THR 304 0.08 LYS 127 -0.05 GLN 90
THR 304 0.08 ASN 128 -0.04 ARG 89
THR 304 0.08 GLU 129 -0.05 THR 10
THR 304 0.07 ASP 130 -0.05 GLU 9
THR 304 0.08 LYS 131 -0.05 GLU 9
THR 304 0.08 LEU 132 -0.07 GLU 9
THR 304 0.07 ASN 133 -0.09 GLU 9
THR 304 0.06 HIS 134 -0.11 GLU 9
THR 304 0.07 HIS 135 -0.13 GLU 9
THR 304 0.09 GLN 136 -0.11 GLU 9
THR 304 0.07 ARG 137 -0.10 THR 10
THR 304 0.07 ILE 138 -0.13 THR 10
THR 304 0.08 GLY 139 -0.14 THR 10
THR 304 0.08 LEU 140 -0.12 ARG 89
THR 304 0.07 LYS 141 -0.13 GLY 80
THR 304 0.07 TYR 142 -0.17 THR 10
ASP 276 0.09 PHE 143 -0.16 GLY 80
ASP 276 0.08 GLY 144 -0.20 GLY 80
ASP 276 0.07 ASP 145 -0.23 THR 10
ASP 276 0.09 PHE 146 -0.23 THR 10
ASP 276 0.10 GLU 147 -0.26 ASP 17
ASP 276 0.08 LYS 148 -0.31 THR 10
ASP 276 0.07 ARG 149 -0.39 GLU 9
ASP 276 0.06 ILE 150 -0.38 GLU 9
HIS 34 0.05 PRO 151 -0.40 GLU 9
HIS 34 0.06 ARG 152 -0.40 GLU 9
HIS 34 0.05 GLU 153 -0.35 GLU 9
HIS 34 0.05 GLU 154 -0.32 GLU 9
HIS 34 0.07 MET 155 -0.34 GLU 9
HIS 34 0.07 LEU 156 -0.32 GLU 9
HIS 34 0.06 GLN 157 -0.29 GLU 9
HIS 34 0.07 MET 158 -0.28 GLU 9
HIS 34 0.08 GLN 159 -0.28 GLU 9
HIS 34 0.07 ASP 160 -0.26 GLU 9
HIS 34 0.07 ILE 161 -0.24 GLU 9
HIS 34 0.08 VAL 162 -0.24 GLU 9
HIS 34 0.08 LEU 163 -0.24 GLU 9
HIS 34 0.07 ASN 164 -0.22 GLU 9
HIS 34 0.07 GLU 165 -0.21 GLU 9
HIS 34 0.08 VAL 166 -0.21 GLU 9
HIS 34 0.08 LYS 167 -0.20 GLU 9
HIS 34 0.07 LYS 168 -0.19 GLU 9
HIS 34 0.07 VAL 169 -0.19 GLU 9
HIS 34 0.08 ASP 170 -0.18 GLN 8
HIS 34 0.08 SER 171 -0.19 GLN 8
HIS 34 0.09 GLU 172 -0.19 GLN 8
HIS 34 0.09 TYR 173 -0.20 GLN 8
HIS 34 0.10 ILE 174 -0.22 GLN 8
HIS 34 0.10 ALA 175 -0.24 GLN 8
HIS 34 0.11 THR 176 -0.26 GLN 8
HIS 34 0.11 VAL 177 -0.29 GLU 9
HIS 34 0.13 CYS 178 -0.30 GLN 8
HIS 34 0.13 GLY 179 -0.34 GLU 9
HIS 34 0.11 SER 180 -0.41 GLU 9
HIS 34 0.10 PHE 181 -0.39 GLU 9
HIS 34 0.11 ARG 182 -0.36 GLN 8
HIS 34 0.12 ARG 183 -0.40 GLN 8
HIS 34 0.09 GLY 184 -0.44 GLN 8
HIS 34 0.08 ALA 185 -0.50 GLN 8
HIS 34 0.06 GLU 186 -0.51 GLU 9
HIS 34 0.06 SER 187 -0.48 GLU 9
HIS 34 0.07 SER 188 -0.43 GLU 9
ASP 276 0.09 GLY 189 -0.37 GLU 9
HIS 34 0.08 ASP 190 -0.32 GLU 9
HIS 34 0.09 MET 191 -0.31 GLU 9
HIS 34 0.11 ASP 192 -0.29 GLU 9
HIS 34 0.11 VAL 193 -0.26 GLU 9
HIS 34 0.12 LEU 194 -0.24 GLU 9
HIS 34 0.11 LEU 195 -0.22 GLU 9
HIS 34 0.11 THR 196 -0.20 GLN 8
HIS 34 0.10 HIS 197 -0.19 GLN 8
HIS 34 0.10 PRO 198 -0.18 GLN 8
HIS 34 0.10 SER 199 -0.16 GLN 8
HIS 34 0.11 PHE 200 -0.17 GLN 8
HIS 34 0.12 THR 201 -0.16 GLN 8
HIS 34 0.13 SER 202 -0.16 GLN 8
HIS 34 0.12 GLU 203 -0.14 GLN 8
HIS 34 0.10 SER 204 -0.14 GLN 8
HIS 34 0.08 GLN 207 -0.15 GLN 8
HIS 34 0.07 PRO 208 -0.16 GLU 9
HIS 34 0.07 LYS 209 -0.16 GLU 9
HIS 34 0.08 LEU 210 -0.18 GLU 9
HIS 34 0.08 LEU 211 -0.19 GLU 9
HIS 34 0.06 HIS 212 -0.18 GLU 9
HIS 34 0.07 GLN 213 -0.18 GLU 9
HIS 34 0.07 VAL 214 -0.19 GLU 9
HIS 34 0.07 VAL 215 -0.19 GLU 9
HIS 34 0.06 GLU 216 -0.18 GLU 9
HIS 34 0.06 GLN 217 -0.19 GLU 9
HIS 34 0.06 LEU 218 -0.20 GLU 9
HIS 34 0.05 GLN 219 -0.19 GLU 9
HIS 34 0.05 LYS 220 -0.18 GLU 9
HIS 34 0.05 VAL 221 -0.19 GLU 9
HIS 34 0.04 HIS 222 -0.19 GLU 9
HIS 34 0.05 PHE 223 -0.21 GLU 9
HIS 34 0.05 ILE 224 -0.21 GLU 9
HIS 34 0.04 THR 225 -0.19 GLU 9
THR 304 0.05 ASP 226 -0.18 GLU 9
THR 304 0.05 THR 227 -0.17 GLU 9
THR 304 0.06 LEU 228 -0.17 GLU 9
THR 304 0.05 SER 229 -0.17 GLU 9
HIS 34 0.06 LYS 230 -0.18 GLU 9
ALA 32 0.06 GLY 231 -0.17 GLU 9
HIS 34 0.07 GLU 232 -0.17 GLU 9
HIS 34 0.09 THR 233 -0.19 GLU 9
HIS 34 0.09 LYS 234 -0.20 GLU 9
HIS 34 0.08 PHE 235 -0.20 GLU 9
HIS 34 0.07 MET 236 -0.21 GLU 9
HIS 34 0.06 GLY 237 -0.21 GLU 9
HIS 34 0.05 VAL 238 -0.21 GLU 9
HIS 34 0.05 CYS 239 -0.23 GLU 9
HIS 34 0.05 GLN 240 -0.23 THR 10
HIS 34 0.05 LEU 241 -0.24 THR 10
HIS 34 0.04 PRO 242 -0.22 THR 10
HIS 34 0.03 SER 243 -0.23 THR 10
HIS 34 0.03 LYS 244 -0.23 THR 10
HIS 34 0.03 ASN 245 -0.21 THR 10
THR 304 0.03 ASP 246 -0.20 THR 10
THR 304 0.03 GLU 247 -0.23 THR 10
THR 304 0.04 LYS 248 -0.23 THR 10
THR 304 0.04 GLU 249 -0.23 THR 10
ASP 276 0.04 TYR 250 -0.25 THR 10
ASP 276 0.05 PRO 251 -0.25 THR 10
ASP 276 0.05 HIS 252 -0.23 THR 10
ASP 276 0.06 ARG 253 -0.26 GLU 9
HIS 34 0.07 ARG 254 -0.26 GLU 9
HIS 34 0.08 ILE 255 -0.26 GLU 9
HIS 34 0.09 ASP 256 -0.24 GLU 9
HIS 34 0.10 ILE 257 -0.23 GLU 9
HIS 34 0.11 ARG 258 -0.22 GLU 9
HIS 34 0.11 LEU 259 -0.20 GLU 9
HIS 34 0.13 ILE 260 -0.19 GLN 8
HIS 34 0.13 PRO 261 -0.18 GLN 8
HIS 34 0.13 LYS 262 -0.18 GLN 8
HIS 34 0.14 ASP 263 -0.18 GLN 8
HIS 34 0.16 GLN 264 -0.19 GLN 8
HIS 34 0.15 TYR 265 -0.21 GLN 8
HIS 34 0.16 TYR 266 -0.22 GLN 8
HIS 34 0.19 CYS 267 -0.21 GLN 8
HIS 34 0.18 GLY 268 -0.22 GLN 8
HIS 34 0.16 VAL 269 -0.25 GLN 8
HIS 34 0.19 LEU 270 -0.25 GLN 8
HIS 34 0.22 TYR 271 -0.24 GLN 8
HIS 34 0.18 PHE 272 -0.27 GLN 8
HIS 34 0.17 THR 273 -0.31 GLN 8
HIS 34 0.20 GLY 274 -0.30 GLN 8
HIS 34 0.19 SER 275 -0.33 PRO 7
ASN 37 0.26 ASP 276 -0.27 PRO 7
ASN 37 0.29 ILE 277 -0.26 PRO 7
HIS 34 0.24 PHE 278 -0.26 PRO 7
HIS 34 0.28 ASN 279 -0.22 PRO 7
HIS 34 0.34 LYS 280 -0.18 PRO 7
GLY 64 0.30 ASN 281 -0.17 PRO 7
HIS 34 0.27 MET 282 -0.18 PRO 7
HIS 34 0.31 ARG 283 -0.15 PRO 7
HIS 34 0.32 ALA 284 -0.12 PRO 7
GLY 64 0.28 HIS 285 -0.12 PRO 7
HIS 34 0.27 ALA 286 -0.13 PRO 7
HIS 34 0.29 LEU 287 -0.10 PRO 7
GLY 66 0.29 GLU 288 -0.08 PRO 7
GLY 66 0.25 LYS 289 -0.10 GLN 8
HIS 34 0.25 GLY 290 -0.09 GLN 8
HIS 34 0.25 PHE 291 -0.11 GLN 8
HIS 34 0.28 THR 292 -0.12 PRO 7
HIS 34 0.27 ILE 293 -0.15 GLN 8
HIS 34 0.27 ASN 294 -0.16 GLN 8
HIS 34 0.23 GLU 295 -0.20 GLN 8
HIS 34 0.19 TYR 296 -0.18 GLN 8
HIS 34 0.21 THR 297 -0.16 GLN 8
HIS 34 0.23 ILE 298 -0.15 GLN 8
HIS 34 0.23 ARG 299 -0.13 GLN 8
HIS 34 0.23 PRO 300 -0.11 GLN 8
HIS 34 0.26 LEU 301 -0.08 GLN 8
THR 67 0.25 GLY 302 -0.07 GLN 8
THR 67 0.30 VAL 303 -0.05 LEU 311
THR 67 0.33 THR 304 -0.04 GLY 302
HIS 34 0.31 GLY 305 -0.04 GLY 302
HIS 34 0.26 VAL 306 -0.06 PRO 7
HIS 34 0.25 ALA 307 -0.09 GLN 8
HIS 34 0.21 GLY 308 -0.10 GLN 8
HIS 34 0.19 GLU 309 -0.12 GLN 8
HIS 34 0.19 PRO 310 -0.14 GLN 8
HIS 34 0.19 LEU 311 -0.14 GLN 8
HIS 34 0.17 PRO 312 -0.15 GLN 8
HIS 34 0.17 VAL 313 -0.18 GLN 8
HIS 34 0.15 ASP 314 -0.19 GLN 8
HIS 34 0.15 SER 315 -0.21 GLN 8
HIS 34 0.17 GLU 316 -0.22 GLN 8
HIS 34 0.17 LYS 317 -0.21 GLN 8
HIS 34 0.17 ASP 318 -0.18 GLN 8
HIS 34 0.20 ILE 319 -0.18 GLN 8
HIS 34 0.20 PHE 320 -0.18 GLN 8
HIS 34 0.18 ASP 321 -0.16 GLN 8
HIS 34 0.20 TYR 322 -0.15 GLN 8
HIS 34 0.22 ILE 323 -0.14 GLN 8
HIS 34 0.19 GLN 324 -0.15 GLN 8
HIS 34 0.17 LYS 326 -0.19 GLN 8
HIS 34 0.17 TYR 327 -0.22 GLN 8
HIS 34 0.16 ARG 328 -0.26 GLN 8
HIS 34 0.14 GLU 329 -0.30 GLN 8
HIS 34 0.14 PRO 330 -0.34 GLN 8
HIS 34 0.12 LYS 331 -0.39 GLN 8
HIS 34 0.14 ASP 332 -0.36 GLN 8
HIS 34 0.17 ARG 333 -0.34 GLN 8
ASN 37 0.16 SER 334 -0.41 PRO 7
ASN 37 0.20 GLU 335 -0.33 PRO 7

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.