CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  DNA polimerase pura  ***

CA distance fluctuations for 2610141424171094841

---  normal mode 9  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
GLU 335 0.32 GLU 9 -0.00 ALA 78
GLU 335 0.26 THR 10 -0.00 LYS 84
SER 334 0.25 LEU 11 -0.01 ASP 116
SER 334 0.20 ASN 12 -0.02 ASP 116
SER 334 0.21 GLY 13 -0.01 ASP 116
SER 334 0.22 GLY 14 -0.01 ASP 116
GLU 186 0.18 ILE 15 -0.04 ASP 116
GLU 186 0.14 THR 16 -0.03 ASP 116
SER 334 0.15 ASP 17 -0.01 ASP 116
GLU 186 0.14 MET 18 -0.03 ASP 116
GLU 186 0.10 LEU 19 -0.05 ASP 116
GLU 186 0.06 VAL 20 -0.03 THR 304
ARG 149 0.05 GLU 21 -0.02 THR 304
LYS 148 0.06 LEU 22 -0.07 SER 109
ASN 245 0.03 ALA 23 -0.10 SER 109
ASP 92 0.02 ASN 24 -0.10 GLY 305
ASP 92 0.01 PHE 25 -0.13 PRO 108
ASN 24 0.00 GLU 26 -0.19 SER 109
ASP 92 0.00 LYS 27 -0.20 PRO 108
ASP 92 0.02 ASN 28 -0.21 PRO 108
ASP 92 0.01 VAL 29 -0.26 PRO 108
GLU 9 0.00 SER 30 -0.30 PRO 108
LYS 84 0.00 GLN 31 -0.29 PRO 108
ARG 83 0.00 ALA 32 -0.25 SER 109
ARG 83 0.00 ILE 33 -0.24 GLY 305
ARG 83 0.00 HIS 34 -0.21 THR 304
ASN 245 0.02 LYS 35 -0.18 SER 109
ASN 245 0.01 TYR 36 -0.16 THR 304
ASN 245 0.01 ASN 37 -0.17 THR 304
ASN 245 0.03 ALA 38 -0.14 THR 304
GLU 186 0.05 TYR 39 -0.10 SER 109
ASN 245 0.03 ARG 40 -0.11 THR 304
GLU 186 0.04 LYS 41 -0.11 THR 304
GLU 186 0.08 ALA 42 -0.08 THR 304
GLU 186 0.09 ALA 43 -0.04 SER 109
GLU 186 0.07 SER 44 -0.05 THR 304
GLU 186 0.09 VAL 45 -0.05 THR 304
GLU 186 0.12 ILE 46 -0.04 ASP 116
SER 334 0.12 ALA 47 -0.02 ASP 116
GLU 186 0.11 LYS 48 -0.03 ASP 116
GLU 186 0.14 TYR 49 -0.04 ASP 116
SER 334 0.17 PRO 50 -0.03 ASP 116
GLU 186 0.20 HIS 51 -0.03 ASP 116
GLU 186 0.22 LYS 52 -0.03 ASP 116
GLU 186 0.20 ILE 53 -0.05 ASP 116
GLU 186 0.23 LYS 54 -0.05 ASP 116
GLU 186 0.21 SER 55 -0.07 ASP 116
GLU 186 0.17 GLY 56 -0.08 ASP 116
GLU 186 0.17 ALA 57 -0.09 ASP 116
GLU 186 0.17 GLU 58 -0.08 ASP 116
GLU 186 0.15 ALA 59 -0.08 ASP 116
GLU 186 0.13 LYS 60 -0.09 ASP 116
GLU 186 0.13 LYS 61 -0.09 ASP 116
GLU 186 0.11 LEU 62 -0.08 ASP 116
GLU 186 0.08 PRO 63 -0.09 THR 304
GLU 186 0.06 GLY 64 -0.11 THR 304
GLU 186 0.09 VAL 65 -0.09 SER 109
GLU 186 0.08 GLY 66 -0.12 SER 109
GLU 186 0.10 THR 67 -0.13 ASP 116
GLU 186 0.09 LYS 68 -0.14 ASP 116
GLU 186 0.10 ILE 69 -0.11 ASP 116
GLU 186 0.14 ALA 70 -0.10 ASP 116
GLU 186 0.14 GLU 71 -0.12 ASP 116
GLU 186 0.14 LYS 72 -0.11 ASP 116
GLU 186 0.16 ILE 73 -0.08 ASP 116
GLU 186 0.19 ASP 74 -0.09 ASP 116
GLU 186 0.19 GLU 75 -0.10 ASP 116
GLU 186 0.21 PHE 76 -0.07 ASP 116
GLU 186 0.23 LEU 77 -0.06 ASP 116
GLU 186 0.25 ALA 78 -0.07 ASP 116
GLU 186 0.27 THR 79 -0.07 ASP 116
GLU 186 0.28 GLY 80 -0.04 ASP 116
SER 187 0.22 LYS 81 -0.05 ASP 116
ARG 149 0.17 LEU 82 -0.09 ASP 116
LYS 148 0.16 ARG 83 -0.12 ASP 116
LYS 148 0.11 LYS 84 -0.14 ASP 116
LYS 148 0.11 LEU 85 -0.09 ASP 116
LYS 148 0.15 GLU 86 -0.08 ASP 116
LYS 148 0.10 LYS 87 -0.10 ASP 116
GLU 147 0.09 ILE 88 -0.06 VAL 29
PHE 99 0.16 ARG 89 -0.05 VAL 29
PHE 99 0.12 GLN 90 -0.08 ASP 91
GLU 21 0.03 ASP 91 -0.08 GLN 90
LYS 148 0.03 ASP 92 -0.11 THR 93
GLU 9 0.03 THR 93 -0.11 ASP 92
GLU 9 0.05 SER 94 -0.20 SER 30
ARG 89 0.14 SER 95 -0.13 VAL 29
ARG 89 0.09 SER 96 -0.12 SER 30
ARG 89 0.09 ILE 97 -0.21 SER 30
ARG 89 0.15 ASN 98 -0.20 VAL 29
ARG 89 0.16 PHE 99 -0.13 VAL 29
GLY 80 0.11 LEU 100 -0.15 SER 30
GLY 80 0.13 THR 101 -0.20 SER 30
GLY 80 0.17 ARG 102 -0.15 SER 30
GLY 80 0.14 VAL 103 -0.15 SER 30
GLY 80 0.13 THR 104 -0.16 GLN 31
GLU 9 0.11 GLY 105 -0.18 GLN 31
GLU 9 0.10 ILE 106 -0.20 SER 30
GLU 9 0.10 GLY 107 -0.25 SER 30
GLU 9 0.09 PRO 108 -0.30 SER 30
GLU 9 0.07 SER 109 -0.30 SER 30
GLU 9 0.07 ALA 110 -0.24 SER 30
GLU 9 0.07 ALA 111 -0.22 SER 30
GLU 9 0.05 ARG 112 -0.26 SER 30
GLU 9 0.04 LYS 113 -0.21 SER 30
GLU 9 0.04 LEU 114 -0.14 SER 30
GLU 9 0.03 VAL 115 -0.12 SER 30
GLU 9 0.01 ASP 116 -0.14 LYS 84
GLU 9 0.01 GLU 117 -0.11 LYS 68
ASN 28 0.01 GLY 118 -0.09 LYS 84
GLU 9 0.03 ILE 119 -0.07 SER 30
GLU 9 0.04 LYS 120 -0.07 SER 30
GLY 80 0.08 THR 121 -0.04 SER 30
GLY 80 0.11 LEU 122 -0.06 SER 30
THR 79 0.08 GLU 123 -0.02 GLN 31
GLY 80 0.04 ASP 124 -0.04 SER 30
GLY 80 0.06 LEU 125 -0.07 SER 30
GLY 80 0.08 ARG 126 -0.05 GLN 31
GLY 80 0.05 LYS 127 -0.04 GLN 31
GLU 9 0.04 ASN 128 -0.07 SER 30
GLU 9 0.06 GLU 129 -0.09 GLN 31
GLU 9 0.05 ASP 130 -0.10 GLN 31
GLU 9 0.05 LYS 131 -0.12 SER 30
GLU 9 0.07 LEU 132 -0.14 GLN 31
GLU 9 0.08 ASN 133 -0.15 GLN 31
GLU 9 0.09 HIS 134 -0.14 GLN 31
GLU 9 0.10 HIS 135 -0.16 GLN 31
GLU 9 0.09 GLN 136 -0.15 GLN 31
GLY 80 0.09 ARG 137 -0.12 GLN 31
GLY 80 0.12 ILE 138 -0.12 GLN 31
GLY 80 0.13 GLY 139 -0.13 GLN 31
GLY 80 0.13 LEU 140 -0.10 GLN 31
GLY 80 0.13 LYS 141 -0.08 GLN 31
GLY 80 0.16 TYR 142 -0.09 GLN 31
GLY 80 0.18 PHE 143 -0.09 GLN 31
GLY 80 0.21 GLU 144 -0.07 ASN 28
GLY 80 0.21 ASP 145 -0.08 GLN 31
GLY 80 0.21 PHE 146 -0.11 GLN 31
GLY 80 0.24 GLU 147 -0.10 ASN 28
GLY 80 0.26 LYS 148 -0.09 ASN 28
GLY 80 0.27 ARG 149 -0.10 ASN 28
GLY 80 0.25 ILE 150 -0.10 ASN 28
GLY 80 0.26 PRO 151 -0.09 ASN 28
GLY 80 0.25 ARG 152 -0.10 ASN 28
GLY 80 0.24 GLU 153 -0.09 ASN 28
GLY 80 0.22 GLU 154 -0.09 GLN 31
GLY 80 0.22 MET 155 -0.11 GLN 31
GLY 80 0.21 LEU 156 -0.11 GLN 31
GLY 80 0.20 GLN 157 -0.10 GLN 31
GLY 80 0.19 MET 158 -0.11 GLN 31
GLU 9 0.19 GLN 159 -0.12 GLN 31
GLU 9 0.18 ASP 160 -0.11 GLN 31
GLY 80 0.17 ILE 161 -0.11 GLN 31
GLU 9 0.17 VAL 162 -0.13 GLN 31
GLU 9 0.18 LEU 163 -0.13 GLN 31
GLU 9 0.17 ASN 164 -0.12 GLN 31
GLU 9 0.16 GLU 165 -0.12 GLN 31
GLU 9 0.16 VAL 166 -0.13 GLN 31
GLU 9 0.16 LYS 167 -0.13 GLN 31
GLU 9 0.15 LYS 168 -0.12 GLN 31
GLU 9 0.14 LEU 169 -0.13 GLN 31
GLU 9 0.15 ASP 170 -0.13 GLN 31
GLU 9 0.16 PRO 171 -0.13 GLN 31
GLU 9 0.16 GLU 172 -0.14 GLN 31
GLU 9 0.16 TYR 173 -0.15 GLN 31
GLU 9 0.17 ILE 174 -0.15 GLN 31
GLU 9 0.18 ALA 175 -0.15 GLN 31
GLU 9 0.19 THR 176 -0.15 GLN 31
GLU 9 0.20 VAL 177 -0.15 GLN 31
GLU 9 0.21 CYS 178 -0.16 GLN 31
GLU 9 0.23 GLY 179 -0.16 GLN 31
GLU 9 0.25 SER 180 -0.15 GLN 31
GLU 9 0.24 PHE 181 -0.13 GLN 31
GLU 9 0.24 ARG 182 -0.14 GLN 31
GLU 9 0.26 ARG 183 -0.14 GLN 31
GLU 9 0.27 GLY 184 -0.12 GLN 31
GLU 9 0.27 ALA 185 -0.12 ASN 28
GLY 80 0.28 GLU 186 -0.10 ASN 28
GLY 80 0.28 SER 187 -0.11 ASN 28
GLY 80 0.25 SER 188 -0.12 GLN 31
GLY 80 0.24 GLY 189 -0.13 GLN 31
GLY 80 0.20 ASP 190 -0.14 GLN 31
GLU 9 0.19 MET 191 -0.15 GLN 31
GLU 9 0.19 ASP 192 -0.17 GLN 31
GLU 9 0.18 VAL 193 -0.16 GLN 31
GLU 9 0.18 LEU 194 -0.17 GLN 31
GLU 9 0.17 LEU 195 -0.17 GLN 31
GLU 9 0.16 THR 196 -0.17 GLN 31
GLU 9 0.16 HIS 197 -0.16 GLN 31
GLU 9 0.15 PRO 198 -0.17 GLN 31
GLU 9 0.14 ASN 199 -0.17 GLN 31
GLU 9 0.14 PHE 200 -0.18 GLN 31
GLU 9 0.15 THR 201 -0.19 GLN 31
GLU 9 0.14 SER 202 -0.21 GLN 31
GLU 9 0.14 GLU 203 -0.20 GLN 31
GLU 9 0.13 SER 204 -0.19 GLN 31
GLU 9 0.12 SER 205 -0.19 GLN 31
GLU 9 0.12 LYS 206 -0.20 GLN 31
GLU 9 0.13 GLN 207 -0.18 GLN 31
GLU 9 0.12 PRO 208 -0.18 GLN 31
GLU 9 0.12 LYS 209 -0.16 GLN 31
GLU 9 0.14 LEU 210 -0.16 GLN 31
GLU 9 0.14 LEU 211 -0.17 GLN 31
GLU 9 0.13 HIS 212 -0.16 GLN 31
GLU 9 0.13 ARG 213 -0.15 GLN 31
GLU 9 0.14 VAL 214 -0.14 GLN 31
GLU 9 0.14 VAL 215 -0.14 GLN 31
GLU 9 0.13 GLU 216 -0.13 GLN 31
GLU 9 0.13 GLN 217 -0.13 GLN 31
GLU 9 0.14 LEU 218 -0.12 GLN 31
GLU 9 0.13 GLN 219 -0.12 GLN 31
GLU 9 0.13 LYS 220 -0.11 GLN 31
GLY 80 0.14 VAL 221 -0.10 GLN 31
GLY 80 0.14 ARG 222 -0.10 GLN 31
GLY 80 0.15 PHE 223 -0.11 GLN 31
GLY 80 0.14 ILE 224 -0.12 GLN 31
GLY 80 0.14 THR 225 -0.11 GLN 31
GLY 80 0.13 ASP 226 -0.12 GLN 31
GLU 9 0.12 THR 227 -0.14 GLN 31
GLU 9 0.12 LEU 228 -0.16 GLN 31
GLU 9 0.12 SER 229 -0.18 GLN 31
GLU 9 0.12 LYS 230 -0.17 GLN 31
GLU 9 0.12 GLY 231 -0.19 GLN 31
GLU 9 0.12 GLU 232 -0.19 GLN 31
GLU 9 0.14 THR 233 -0.20 GLN 31
GLU 9 0.14 LYS 234 -0.20 GLN 31
GLU 9 0.14 PHE 235 -0.18 GLN 31
GLU 9 0.14 MET 236 -0.17 GLN 31
GLY 80 0.14 GLY 237 -0.15 GLN 31
GLY 80 0.15 VAL 238 -0.13 GLN 31
GLY 80 0.16 CYS 239 -0.12 GLN 31
GLY 80 0.18 GLN 240 -0.10 GLN 31
GLY 80 0.18 LEU 241 -0.09 GLN 31
THR 79 0.17 PRO 242 -0.08 GLN 31
THR 79 0.18 SER 243 -0.07 GLN 31
THR 79 0.18 GLU 244 -0.06 GLN 31
THR 79 0.19 ASN 245 -0.05 ASN 28
THR 79 0.20 GLU 249 -0.06 ASN 28
THR 79 0.21 TYR 250 -0.07 GLN 31
THR 79 0.20 PRO 251 -0.08 GLN 31
GLY 80 0.19 HIS 252 -0.10 GLN 31
GLY 80 0.19 ARG 253 -0.11 GLN 31
GLY 80 0.18 ARG 254 -0.14 GLN 31
GLY 80 0.17 ILE 255 -0.15 GLN 31
GLU 9 0.16 ASP 256 -0.17 GLN 31
GLU 9 0.16 ILE 257 -0.17 GLN 31
GLU 9 0.16 ARG 258 -0.19 GLN 31
GLU 9 0.16 LEU 259 -0.19 GLN 31
GLU 9 0.16 ILE 260 -0.19 GLN 31
GLU 9 0.16 PRO 261 -0.19 GLN 31
GLU 9 0.17 LYS 262 -0.18 GLN 31
GLU 9 0.17 ASP 263 -0.19 GLN 31
GLU 9 0.17 GLN 264 -0.20 GLN 31
GLU 9 0.18 TYR 265 -0.19 GLN 31
GLU 9 0.20 TYR 266 -0.19 GLN 31
GLU 9 0.20 CYS 267 -0.20 GLN 31
GLU 9 0.19 GLY 268 -0.20 GLN 31
GLU 9 0.21 VAL 269 -0.19 GLN 31
GLU 9 0.22 LEU 270 -0.19 GLN 31
GLU 9 0.22 TYR 271 -0.21 GLN 31
GLU 9 0.21 PHE 272 -0.20 GLN 31
GLU 9 0.23 THR 273 -0.18 GLN 31
GLU 9 0.25 GLY 274 -0.18 GLN 31
GLU 9 0.27 SER 275 -0.19 GLN 31
GLU 9 0.26 ASP 276 -0.22 GLN 31
GLU 9 0.28 ILE 277 -0.21 GLN 31
GLU 9 0.28 PHE 278 -0.19 GLN 31
GLU 9 0.25 ASN 279 -0.21 GLN 31
GLU 9 0.25 LYS 280 -0.23 GLN 31
GLU 9 0.27 ASN 281 -0.21 GLN 31
GLU 9 0.25 MET 282 -0.21 GLN 31
GLU 9 0.23 ARG 283 -0.23 GLN 31
GLU 9 0.24 ALA 284 -0.23 GLN 31
GLU 9 0.25 HIS 285 -0.21 GLN 31
GLU 9 0.23 ALA 286 -0.22 GLN 31
GLU 9 0.22 LEU 287 -0.23 GLN 31
GLU 9 0.23 GLU 288 -0.22 GLN 31
GLU 9 0.22 LYS 289 -0.21 GLN 31
GLU 9 0.20 GLY 290 -0.22 GLN 31
GLU 9 0.20 PHE 291 -0.23 GLN 31
GLU 9 0.19 THR 292 -0.24 GLN 31
GLU 9 0.20 ILE 293 -0.24 GLN 31
GLU 9 0.19 ASN 294 -0.25 GLN 31
GLU 9 0.19 GLU 295 -0.23 GLN 31
GLU 9 0.18 TYR 296 -0.23 GLN 31
GLU 9 0.18 THR 297 -0.22 GLN 31
GLU 9 0.19 ILE 298 -0.22 GLN 31
GLU 9 0.18 ARG 299 -0.23 GLN 31
GLU 9 0.18 PRO 300 -0.22 GLN 31
GLU 9 0.18 LEU 301 -0.24 GLN 31
GLU 9 0.17 GLY 302 -0.24 GLN 31
GLU 9 0.16 VAL 303 -0.24 GLN 31
GLU 9 0.15 THR 304 -0.26 GLN 31
GLU 9 0.16 GLY 305 -0.27 GLN 31
GLU 9 0.15 VAL 306 -0.27 GLN 31
GLU 9 0.16 ALA 307 -0.25 GLN 31
GLU 9 0.16 GLY 308 -0.24 GLN 31
GLU 9 0.16 GLU 309 -0.22 GLN 31
GLU 9 0.17 PRO 310 -0.22 GLN 31
GLU 9 0.18 LEU 311 -0.20 GLN 31
GLU 9 0.18 PRO 312 -0.19 GLN 31
GLU 9 0.19 VAL 313 -0.18 GLN 31
GLU 9 0.19 ASP 314 -0.17 GLN 31
GLU 9 0.20 SER 315 -0.17 GLN 31
GLU 9 0.22 GLU 316 -0.17 GLN 31
GLU 9 0.22 GLN 317 -0.17 GLN 31
GLU 9 0.21 ASP 318 -0.18 GLN 31
GLU 9 0.22 ILE 319 -0.19 GLN 31
GLU 9 0.23 PHE 320 -0.18 GLN 31
GLU 9 0.22 ASP 321 -0.17 GLN 31
GLU 9 0.21 TYR 322 -0.19 GLN 31
GLU 9 0.23 ILE 323 -0.19 GLN 31
GLU 9 0.24 GLN 324 -0.18 GLN 31
GLU 9 0.25 TRP 325 -0.17 GLN 31
GLU 9 0.26 ARG 326 -0.15 GLN 31
GLU 9 0.26 TYR 327 -0.15 GLN 31
GLU 9 0.27 ARG 328 -0.15 GLN 31
GLU 9 0.27 GLU 329 -0.14 GLN 31
GLU 9 0.26 PRO 330 -0.15 GLN 31
GLU 9 0.28 LYS 331 -0.13 GLN 31
GLU 9 0.30 ASP 332 -0.14 GLN 31
GLU 9 0.29 ARG 333 -0.16 GLN 31
GLU 9 0.31 SER 334 -0.16 ASN 28
GLU 9 0.32 GLU 335 -0.17 GLN 31

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.