CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  apo  ***

Normal Mode Analysis for ID 2610160951151510307

%Projmod-Wn> Different number of atoms for the other conformer. %Projmod-Wn> Different number of residues for the other conformer. %Projmod-Er> Atom 3161 of first conformer: HIS 447 N not found in second one.

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.7111
mode 8 1.20 0.6333
mode 9 1.63 0.5838
mode 10 2.05 0.1114
mode 11 2.11 0.2701
mode 12 2.23 0.5159
mode 13 2.31 0.5653
mode 14 2.44 0.5219
mode 15 2.53 0.2635
mode 16 2.64 0.1728
mode 17 2.84 0.1902
mode 18 3.05 0.1751
mode 19 3.13 0.3373
mode 20 3.27 0.4209
mode 21 3.31 0.1407
mode 22 3.42 0.2631
mode 23 3.45 0.2179
mode 24 3.55 0.2395
mode 25 3.59 0.2662
mode 26 3.61 0.2333
mode 27 3.75 0.0618
mode 28 3.84 0.2687
mode 29 3.87 0.2447
mode 30 3.89 0.4104
mode 31 3.93 0.2893
mode 32 3.97 0.4375
mode 33 4.00 0.2940
mode 34 4.03 0.3181
mode 35 4.18 0.4553
mode 36 4.21 0.3956
mode 37 4.26 0.3577
mode 38 4.32 0.3647
mode 39 4.40 0.2874
mode 40 4.44 0.3275
mode 41 4.48 0.4340
mode 42 4.51 0.4462
mode 43 4.54 0.2890
mode 44 4.60 0.3776
mode 45 4.65 0.4414
mode 46 4.69 0.4629
mode 47 4.75 0.4389
mode 48 4.83 0.3757
mode 49 4.85 0.2791
mode 50 4.90 0.3931
mode 51 4.96 0.3397
mode 52 4.99 0.3235
mode 53 4.99 0.2004
mode 54 5.01 0.3354
mode 55 5.05 0.5436
mode 56 5.08 0.3536
mode 57 5.10 0.4203
mode 58 5.12 0.3609
mode 59 5.16 0.3102
mode 60 5.21 0.3704
mode 61 5.24 0.4288
mode 62 5.30 0.3993
mode 63 5.32 0.3851
mode 64 5.40 0.3364
mode 65 5.44 0.3624
mode 66 5.46 0.4639
mode 67 5.49 0.3118
mode 68 5.55 0.4802
mode 69 5.61 0.4647
mode 70 5.66 0.4835
mode 71 5.69 0.3504
mode 72 5.72 0.2985
mode 73 5.74 0.3864
mode 74 5.77 0.2129
mode 75 5.81 0.2757
mode 76 5.86 0.4428
mode 77 5.86 0.3673
mode 78 5.89 0.3609
mode 79 5.93 0.3177
mode 80 5.96 0.3915
mode 81 5.98 0.2799
mode 82 5.99 0.4591
mode 83 6.04 0.3491
mode 84 6.08 0.3949
mode 85 6.12 0.3759
mode 86 6.16 0.4418
mode 87 6.19 0.4723
mode 88 6.21 0.4150
mode 89 6.25 0.3567
mode 90 6.26 0.2174
mode 91 6.32 0.3454
mode 92 6.34 0.4179
mode 93 6.36 0.4830
mode 94 6.37 0.5094
mode 95 6.41 0.4021
mode 96 6.43 0.4848
mode 97 6.49 0.4488
mode 98 6.52 0.3699
mode 99 6.55 0.4222
mode 100 6.58 0.4589
mode 101 6.62 0.4349
mode 102 6.62 0.3967
mode 103 6.69 0.4129
mode 104 6.70 0.3067
mode 105 6.73 0.3684
mode 106 6.77 0.4678

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.