CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  LIPID BINDING PROTEIN 11-OCT-04 1XQ8  ***

Normal Mode Analysis for ID 2610161418291556785

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6654
mode 8 1.03 0.6895
mode 9 1.71 0.5486
mode 10 2.07 0.5631
mode 11 2.45 0.6132
mode 12 3.94 0.6240
mode 13 4.28 0.7186
mode 14 6.32 0.6806
mode 15 7.80 0.7720
mode 16 9.22 0.6598
mode 17 10.90 0.5554
mode 18 12.40 0.6907
mode 19 13.81 0.4962
mode 20 14.26 0.5961
mode 21 16.40 0.5441
mode 22 18.20 0.6692
mode 23 18.63 0.5502
mode 24 19.75 0.2915
mode 25 21.22 0.5865
mode 26 25.86 0.6160
mode 27 27.97 0.6645
mode 28 28.19 0.3613
mode 29 30.85 0.3077
mode 30 33.92 0.5642
mode 31 34.95 0.5434
mode 32 35.51 0.2524
mode 33 38.46 0.5047
mode 34 41.36 0.4478
mode 35 44.19 0.4204
mode 36 44.60 0.4404
mode 37 45.71 0.3579
mode 38 46.71 0.5053
mode 39 51.17 0.3656
mode 40 53.86 0.3994
mode 41 54.85 0.7035
mode 42 55.92 0.4211
mode 43 57.28 0.4514
mode 44 59.63 0.5731
mode 45 61.10 0.5170
mode 46 62.59 0.4016
mode 47 65.92 0.5843
mode 48 67.96 0.5373
mode 49 70.98 0.1601
mode 50 74.53 0.5143
mode 51 74.89 0.6472
mode 52 77.35 0.5557
mode 53 77.73 0.1099
mode 54 80.52 0.1303
mode 55 83.49 0.2954
mode 56 84.63 0.4957
mode 57 89.92 0.2564
mode 58 90.60 0.2975
mode 59 91.44 0.2508
mode 60 93.12 0.4242
mode 61 95.80 0.5317
mode 62 96.49 0.1796
mode 63 97.96 0.5907
mode 64 98.48 0.3141
mode 65 100.16 0.4692
mode 66 102.68 0.1398
mode 67 104.06 0.3372
mode 68 110.08 0.3333
mode 69 113.90 0.2743
mode 70 114.18 0.3454
mode 71 115.36 0.4855
mode 72 116.01 0.4780
mode 73 116.88 0.5118
mode 74 119.97 0.0614
mode 75 121.11 0.5885
mode 76 123.50 0.2167
mode 77 124.95 0.2570
mode 78 128.96 0.3350
mode 79 130.38 0.3580
mode 80 130.64 0.4211
mode 81 131.95 0.4698
mode 82 133.60 0.4474
mode 83 137.36 0.4818
mode 84 138.62 0.2918
mode 85 142.31 0.2540
mode 86 143.33 0.3265
mode 87 144.86 0.1457
mode 88 145.86 0.3867
mode 89 148.42 0.4775
mode 90 150.73 0.0994
mode 91 151.77 0.4808
mode 92 154.80 0.2304
mode 93 155.04 0.4333
mode 94 157.67 0.2832
mode 95 158.89 0.4840
mode 96 159.79 0.3367
mode 97 160.98 0.1088
mode 98 162.02 0.0579
mode 99 162.96 0.3495
mode 100 163.32 0.3411
mode 101 164.49 0.1210
mode 102 165.84 0.0403
mode 103 168.49 0.2861
mode 104 169.77 0.2539
mode 105 171.70 0.3145
mode 106 174.01 0.1444

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.